TY - JOUR
T1 - Negadavirga shengliensis gen. nov., sp. nov., a novel member of the family Cyclobacteriaceae isolated from oil-contaminated saline soil
AU - Hu, Bing
AU - Yang, Qian
AU - Cai, Man
AU - Tang, Yue Qin
AU - Zhao, Gui Fang
AU - Wu, Xiao Lei
N1 - Publisher Copyright:
© 2014, Springer International Publishing Switzerland.
PY - 2015/3
Y1 - 2015/3
N2 - Four novel Gram-stain-negative, rod-shaped, and non-motile bacterial strains, SLG210-21T, SLG210-4, SLG210-5 and SLG210-14, were isolated from oil-contaminated saline soil in Shengli Oilfield, China. Growth were observed at 25–42 °C (optimum 37 °C), in the presence of 0–10 % (w/v) NaCl (optimum 0–1 %) and at pH 4.0–10.0 (optimum pH 7.6–8.6). All the strains were positive for catalase and α, β-galactosidase activities and nitrogen reduction, and negative for oxidase activity, glucose fermentation and hydrolysis of agar, starch, gelatin, Tween 40, 60 and 80. The DNA G+C contents of the four strains were 41.3–43.0 mol% and the predominant respiratory quinones were all menaquinone-7. The major fatty acids were iso-C15:0, anteiso-C15:0, summed feature 3 (C16:1ω7c and/or C16:1ω6c), C16:1ω5c and summed feature 9 (iso-C17:1ω9c and/or 10-methyl C16:0), while the polar lipids consisted of phosphatidylcholine, phosphatidylethanolamine, glycolipid, two unidentified phospholipids and two unidentified amino lipids. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the four strains clustered together to form a stable branch in the family Cyclobacteriaceae, and were most closely related to the genera Cyclobacterium and Echinicola with the 16S rRNA gene sequence similarities being 88.6–90.3 and 89.6–91.4 %, respectively. DNA–DNA hybridization between SLG210-21T and the other three strains showed the relatedness of 93.8 ± 4.5, 96.2 ± 4.2 and 82.3 ± 4.8 %, respectively. Based on the polyphasic analysis, a novel species in a new genus, Negadavirga shengliensis gen. nov., sp. nov., is proposed with SLG210-21T (=LMG 27734T = CGMCC1.12768T) as the type strain.
AB - Four novel Gram-stain-negative, rod-shaped, and non-motile bacterial strains, SLG210-21T, SLG210-4, SLG210-5 and SLG210-14, were isolated from oil-contaminated saline soil in Shengli Oilfield, China. Growth were observed at 25–42 °C (optimum 37 °C), in the presence of 0–10 % (w/v) NaCl (optimum 0–1 %) and at pH 4.0–10.0 (optimum pH 7.6–8.6). All the strains were positive for catalase and α, β-galactosidase activities and nitrogen reduction, and negative for oxidase activity, glucose fermentation and hydrolysis of agar, starch, gelatin, Tween 40, 60 and 80. The DNA G+C contents of the four strains were 41.3–43.0 mol% and the predominant respiratory quinones were all menaquinone-7. The major fatty acids were iso-C15:0, anteiso-C15:0, summed feature 3 (C16:1ω7c and/or C16:1ω6c), C16:1ω5c and summed feature 9 (iso-C17:1ω9c and/or 10-methyl C16:0), while the polar lipids consisted of phosphatidylcholine, phosphatidylethanolamine, glycolipid, two unidentified phospholipids and two unidentified amino lipids. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the four strains clustered together to form a stable branch in the family Cyclobacteriaceae, and were most closely related to the genera Cyclobacterium and Echinicola with the 16S rRNA gene sequence similarities being 88.6–90.3 and 89.6–91.4 %, respectively. DNA–DNA hybridization between SLG210-21T and the other three strains showed the relatedness of 93.8 ± 4.5, 96.2 ± 4.2 and 82.3 ± 4.8 %, respectively. Based on the polyphasic analysis, a novel species in a new genus, Negadavirga shengliensis gen. nov., sp. nov., is proposed with SLG210-21T (=LMG 27734T = CGMCC1.12768T) as the type strain.
KW - 16S rRNA gene sequences
KW - Negadavirga shengliensis gen. nov., sp. nov
KW - Oil-contaminated saline soil
KW - Polyphasic taxonomy
UR - http://www.scopus.com/inward/record.url?scp=84925489057&partnerID=8YFLogxK
U2 - 10.1007/s10482-014-0361-7
DO - 10.1007/s10482-014-0361-7
M3 - Article
C2 - 25528341
AN - SCOPUS:84925489057
SN - 0003-6072
VL - 107
SP - 663
EP - 673
JO - Antonie van Leeuwenhoek
JF - Antonie van Leeuwenhoek
IS - 3
ER -