SISP: A new framework for searching the informative subgraph based on PSO

A significant number of applications on graph require the key relations among a group of query nodes. Given a relational graph such as social network or biochemical interaction, an informative subgraph is urgent, which can best explain the relationships among a group of given query nodes. Based on Particle Swarm Optimization (PSO), a new framework of SISP (Searching the Informative Subgraph based on PSO) is proposed. SISP contains three key stages. In the initialization stage, a random spreading method is proposed, which can effectively guarantee the connectivity of the nodes in each particle; In the calculating stage of fitness, a fitness function is designed by incorporating a sign function with the goodness score; In the update stage, the intersection-based particle extension method and rule-based particle compression method are proposed. To evaluate the qualities of returned subgraphs, the appropriate calculating of goodness score is studied. Considering the importance and relevance of a node together, we present the PNR method, which makes the definition of informativeness more reliable and the returned subgraph more satisfying. At last, we present experiments on a real dataset and a synthetic dataset separately. The experimental results confirm that the proposed methods achieve increased accuracy and are efficient for any query set.