Super-Resolved q-Space Deep Learning

Chuyang Ye*, Yu Qin, Chenghao Liu, Yuxing Li, Xiangzhu Zeng, Zhiwen Liu

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

11 Citations (Scopus)

Abstract

q-Space deep learning (q-DL) enables accurate estimation of tissue microstructure from diffusion magnetic resonance imaging (dMRI) scans with signals undersampled in the q-space. However, in many scenarios, such as clinical settings, the quality of tissue microstructure estimation is limited not only by q-space undersampling but also by low spatial resolution. Therefore, in this work, we extend q-DL to super-resolved tissue microstructure estimation, which is referred to as super-resolved q-DL. In super-resolved q-DL, low resolution (LR) image patches of diffusion signals are mapped directly to high resolution (HR) tissue microstructure patches with a deep network. Specifically, inspired by the successful integration of sparse representation into q-DL, we have designed an end-to-end deep network that comprises two functional components. The first component computes a sparse representation of diffusion signals at each voxel via convolutions, where the network structure is constructed by unfolding an iterative optimization process. In the second component, convolutional layers with different kernel sizes are used to compute HR tissue microstructure patches from the LR patches of sparse representation. The weights in the two components are learned jointly. Experiments were performed on brain dMRI data with a reduced number of diffusion gradients and a low spatial resolution, where the proposed approach outperforms competing methods.

Original languageEnglish
Title of host publicationMedical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings
EditorsDinggang Shen, Pew-Thian Yap, Tianming Liu, Terry M. Peters, Ali Khan, Lawrence H. Staib, Caroline Essert, Sean Zhou
PublisherSpringer Science and Business Media Deutschland GmbH
Pages582-589
Number of pages8
ISBN (Print)9783030322472
DOIs
Publication statusPublished - 2019
Event22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019 - Shenzhen, China
Duration: 13 Oct 201917 Oct 2019

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume11766 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019
Country/TerritoryChina
CityShenzhen
Period13/10/1917/10/19

Keywords

  • Diffusion MRI
  • Super-resolution
  • q-Space deep learning

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