Dense Encoder-Decoder Network based on Two-Level Context Enhanced Residual Attention Mechanism for Segmentation of Breast Tumors in Magnetic Resonance Imaging

Ying Gao, Yin Zhao, Xiongwen Luo, Xiping Hu, Changhong Liang

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

13 Citations (Scopus)

Abstract

Aiming to effective early detection of breast cancer, automatic tumor segmentation based on breast Magnetic Resonance Imaging (MRI) is concentrated by more and more researchers. This paper proposes a dense encoder-decoder network based on two-level context enhanced residual attention mechanism (TLCRAM-DED). With respect to TLCRAM-DED, we design the encoding structure combining two-level residual attention structure with dense block to extract and refine the features of different layers. Meanwhile, a dense multi-scale atrous convolution is used at the end of the encoder to obtain a larger receptive field and enrich the extracted semantic information. Moreover, residual attention structure (RAS) is also used for the refinement during decoding stage, while a long connection formed with the encoder RAS output is applied to supplement the features and to gradually recover the segmentation details. We validated prosed model in the DCE sequence of challenging breast cancer MRI dataset. The average Dice coefficient is up to 81.04%, which outperforms compared state-of-the-arts.

Original languageEnglish
Title of host publicationProceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019
EditorsIllhoi Yoo, Jinbo Bi, Xiaohua Tony Hu
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages1123-1129
Number of pages7
ISBN (Electronic)9781728118673
DOIs
Publication statusPublished - Nov 2019
Externally publishedYes
Event2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019 - San Diego, United States
Duration: 18 Nov 201921 Nov 2019

Publication series

NameProceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019

Conference

Conference2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019
Country/TerritoryUnited States
CitySan Diego
Period18/11/1921/11/19

Keywords

  • Deep learning
  • breast tumor segmentation
  • dense encoder-decoder network
  • multi-scale atrous convolution
  • residual attention structure

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