TY - JOUR
T1 - Estimating Functional Connectivity by Integration of Inherent Brain Function Activity Pattern Priors
AU - Zhu, Zhiyuan
AU - Zhen, Zonglei
AU - Wu, Xia
AU - Li, Shuo
N1 - Publisher Copyright:
© 2004-2012 IEEE.
PY - 2021
Y1 - 2021
N2 - Brain functional connectivity (FC) has shown great potential in becoming biomarkers of brain status. However, the problem of accurately estimating FC from complex-noisy fMRI time series remains unsolved. Usually, a regularization function is more appropriate in fitting the real inherent properties of the brain function activity pattern, which can further limit noise interference to improve the accuracy of the estimated result. Recently, the neuroscientists widely suggested that the inherent brain function activity pattern indicates sparse, modular and overlapping topology. However, previous studies have never considered this factual characteristic. Thus, we propose a novel method by integration of these inherent brain function activity pattern priors to estimate FC. Extensive experiments on synthetic data demonstrate that our method can more accurately estimate the FC than previous. Then, we applied the estimated FC to predict the symptom severity of depressed patients, the symptom severity is related to subtle abnormal changes in the brain function activity, a more accurate FC can more effectively capture the subtle abnormal brain function activity changes. As results, our method better than others with a higher correlation coefficient of 0.4201. Moreover, the overlapping probability of each brain region can be further explored by the proposed method.
AB - Brain functional connectivity (FC) has shown great potential in becoming biomarkers of brain status. However, the problem of accurately estimating FC from complex-noisy fMRI time series remains unsolved. Usually, a regularization function is more appropriate in fitting the real inherent properties of the brain function activity pattern, which can further limit noise interference to improve the accuracy of the estimated result. Recently, the neuroscientists widely suggested that the inherent brain function activity pattern indicates sparse, modular and overlapping topology. However, previous studies have never considered this factual characteristic. Thus, we propose a novel method by integration of these inherent brain function activity pattern priors to estimate FC. Extensive experiments on synthetic data demonstrate that our method can more accurately estimate the FC than previous. Then, we applied the estimated FC to predict the symptom severity of depressed patients, the symptom severity is related to subtle abnormal changes in the brain function activity, a more accurate FC can more effectively capture the subtle abnormal brain function activity changes. As results, our method better than others with a higher correlation coefficient of 0.4201. Moreover, the overlapping probability of each brain region can be further explored by the proposed method.
KW - Functional connectivity
KW - depression
KW - sparse inverse covariance estimation
KW - sparse overlapping modularized priors
UR - http://www.scopus.com/inward/record.url?scp=85121758824&partnerID=8YFLogxK
U2 - 10.1109/TCBB.2020.2974952
DO - 10.1109/TCBB.2020.2974952
M3 - Article
C2 - 32086218
AN - SCOPUS:85121758824
SN - 1545-5963
VL - 18
SP - 2420
EP - 2430
JO - IEEE/ACM Transactions on Computational Biology and Bioinformatics
JF - IEEE/ACM Transactions on Computational Biology and Bioinformatics
IS - 6
ER -