TY - GEN
T1 - Semi-supervised Intracranial Aneurysm Segmentation with Selected Unlabeled Data
AU - Lu, Shiyu
AU - Wang, Hao
AU - Ye, Chuyang
N1 - Publisher Copyright:
© 2023, The Author(s), under exclusive license to Springer Nature Switzerland AG.
PY - 2023
Y1 - 2023
N2 - The intracranial aneurysm is a common life-threatening disease, and its rupture can lead directly to subarachnoid haemorrhage, with a mortality rate of up to one-third. Therefore, the diagnosis of intracranial aneurysms is of great significance. The widespread use of advanced imaging techniques, such as computed tomography angiography (CTA) and magnetic resonance angiography (MRA), has made it possible to diagnose intracranial aneurysms at an early stage. However, manual annotation of intracranial aneurysms is very time-consuming and labour-intensive, making it difficult to obtain a sufficient amount of labeled data. For deep learning, it is difficult to train reliable segmentation models with only a small amount of labeled data. On this basis, semi-supervised aneurysm segmentation can be used to better exploit the small amount of labeled data and abundant unlabeled data. In practice, the unlabeled data may comprise both images with or without aneurysms, yet existing semi-supervised learning methods do not filter the training data to remove the data aneurysms, which may negatively impact model training as the data is purely negative. Therefore, we propose a semi-supervised approach to intracranial aneurysm segmentation with unlabeled data selection, where negative data is excluded from model training. Specifically, we train a 2D image classification network to filter negative samples without aneurysms and then a 3D image segmentation network based on the filtered data for semi-supervised aneurysm segmentation. The proposed method was evaluated on an MRA dataset, and the results show that our method performs better than the vanilla semi-supervised learning that does not exclude negative unlabeled data.
AB - The intracranial aneurysm is a common life-threatening disease, and its rupture can lead directly to subarachnoid haemorrhage, with a mortality rate of up to one-third. Therefore, the diagnosis of intracranial aneurysms is of great significance. The widespread use of advanced imaging techniques, such as computed tomography angiography (CTA) and magnetic resonance angiography (MRA), has made it possible to diagnose intracranial aneurysms at an early stage. However, manual annotation of intracranial aneurysms is very time-consuming and labour-intensive, making it difficult to obtain a sufficient amount of labeled data. For deep learning, it is difficult to train reliable segmentation models with only a small amount of labeled data. On this basis, semi-supervised aneurysm segmentation can be used to better exploit the small amount of labeled data and abundant unlabeled data. In practice, the unlabeled data may comprise both images with or without aneurysms, yet existing semi-supervised learning methods do not filter the training data to remove the data aneurysms, which may negatively impact model training as the data is purely negative. Therefore, we propose a semi-supervised approach to intracranial aneurysm segmentation with unlabeled data selection, where negative data is excluded from model training. Specifically, we train a 2D image classification network to filter negative samples without aneurysms and then a 3D image segmentation network based on the filtered data for semi-supervised aneurysm segmentation. The proposed method was evaluated on an MRA dataset, and the results show that our method performs better than the vanilla semi-supervised learning that does not exclude negative unlabeled data.
KW - Aneurysm segmentation
KW - incomplete annotation
KW - semi-supervised learning
UR - http://www.scopus.com/inward/record.url?scp=85172192455&partnerID=8YFLogxK
U2 - 10.1007/978-3-031-33842-7_10
DO - 10.1007/978-3-031-33842-7_10
M3 - Conference contribution
AN - SCOPUS:85172192455
SN - 9783031338410
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 115
EP - 123
BT - Brainlesion
A2 - Bakas, Spyridon
A2 - Baid, Ujjwal
A2 - Baheti, Bhakti
A2 - Crimi, Alessandro
A2 - Malec, Sylwia
A2 - Pytlarz, Monika
A2 - Zenk, Maximilian
A2 - Dorent, Reuben
PB - Springer Science and Business Media Deutschland GmbH
T2 - Proceedings of the 8th International MICCAI Brainlesion Workshop, BrainLes 2022
Y2 - 18 September 2022 through 22 September 2022
ER -