DNA Sequence Design Based on Template Strategy

Wenbin Liu; Shudong Wang; Lin Gao; Fengyue Zhang; Jin Xu

doi:10.1021/ci025645s

DNA Sequence Design Based on Template Strategy

Wenbin Liu^*, Shudong Wang, Lin Gao, Fengyue Zhang, Jin Xu

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

27 Citations (Scopus)

Abstract

In DNA based computation and DNA nanotechnology, the design of proper DNA sequences has turned out to be an elementary problem. This paper takes a further look at the template strategy proposed in work by Frutos, A. G. et al. (Nucleic Acids Res. 1997, 25, 4748-4757). The H-measure proposed by Garzon et al. (Proceedings of the Second Annual Genetic Programming Conference, 1997; pp 472-487) is combined in this strategy to optimize the template and map sets obtained. Finally we describe a constructing method that can still produce more sequences by the results obtained in this paper.

Original language	English
Pages (from-to)	2014-2018
Number of pages	5
Journal	Journal of Chemical Information and Computer Sciences
Volume	43
Issue number	6
DOIs	https://doi.org/10.1021/ci025645s
Publication status	Published - Nov 2003
Externally published	Yes

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10.1021/ci025645s

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title = "DNA Sequence Design Based on Template Strategy",

abstract = "In DNA based computation and DNA nanotechnology, the design of proper DNA sequences has turned out to be an elementary problem. This paper takes a further look at the template strategy proposed in work by Frutos, A. G. et al. (Nucleic Acids Res. 1997, 25, 4748-4757). The H-measure proposed by Garzon et al. (Proceedings of the Second Annual Genetic Programming Conference, 1997; pp 472-487) is combined in this strategy to optimize the template and map sets obtained. Finally we describe a constructing method that can still produce more sequences by the results obtained in this paper.",

author = "Wenbin Liu and Shudong Wang and Lin Gao and Fengyue Zhang and Jin Xu",

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AU - Liu, Wenbin

AU - Wang, Shudong

AU - Gao, Lin

AU - Zhang, Fengyue

AU - Xu, Jin

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AB - In DNA based computation and DNA nanotechnology, the design of proper DNA sequences has turned out to be an elementary problem. This paper takes a further look at the template strategy proposed in work by Frutos, A. G. et al. (Nucleic Acids Res. 1997, 25, 4748-4757). The H-measure proposed by Garzon et al. (Proceedings of the Second Annual Genetic Programming Conference, 1997; pp 472-487) is combined in this strategy to optimize the template and map sets obtained. Finally we describe a constructing method that can still produce more sequences by the results obtained in this paper.

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JO - Journal of Chemical Information and Computer Sciences

JF - Journal of Chemical Information and Computer Sciences

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DNA Sequence Design Based on Template Strategy

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