Deep-stacked auto encoder for liver segmentation

Mubashir Ahmad, Jian Yang*, Danni Ai, Syed Furqan Qadri, Yongtian Wang

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

23 Citations (Scopus)

Abstract

Deep learning methods have been successfully applied to feature learning in medical applications. In this paper, we proposed a Deep Stacked Auto-Encoder (DSAE) for liver segmentation from CT images. The proposed method composes of three major steps. First, we learned the features with unlabeled data using the auto encoder. Second, these features are fine-tuned to classify the liver among other abdominal organs. Using this technique we got promising classification results on 2D CT data. This classification of the data helps to segment the liver from the abdomen. Finally, segmentation of a liver is refined by post processing method. We focused on the high accuracy of the classification task because of its effect on the accuracy of a better segmentation. We trained the deep stacked auto encoder (DSAE) on 2D CT images and experimentally shows that this method has high classification accuracy and can speed up the clinical task to segment the liver. The mean DICE coefficient is noted to be 90.1% which is better than the state of art methods.

Original languageEnglish
Title of host publicationAdvances in Image and Graphics Technologies - 12th Chinese conference, IGTA 2017, Revised Selected Papers
EditorsXiaoru Yuan, Henry Been-Lirn Duh, Yongtian Wang, Yue Liu, Jian Yang, Shengjin Wang, Ran He
PublisherSpringer Verlag
Pages243-251
Number of pages9
ISBN (Print)9789811073885
DOIs
Publication statusPublished - 2018
Event12th Chinese conference on Advances in Image and Graphics Technologies, IGTA 2017 - Beijing, China
Duration: 30 Jun 20171 Jul 2017

Publication series

NameCommunications in Computer and Information Science
Volume757
ISSN (Print)1865-0929

Conference

Conference12th Chinese conference on Advances in Image and Graphics Technologies, IGTA 2017
Country/TerritoryChina
CityBeijing
Period30/06/171/07/17

Keywords

  • Classification
  • Deep learning
  • Liver
  • Segmentation

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