Combining MetaMap and cTAKES in disorder recognition: THCIB at CLEF eHealth lab 2013 task 1

Yunqing Xia; Xiaoshi Zhong; Peng Liu; Cheng Tan; Sen Na; Qinan Hu; Yaohai Huang

Combining MetaMap and cTAKES in disorder recognition: THCIB at CLEF eHealth lab 2013 task 1

Yunqing Xia, Xiaoshi Zhong, Peng Liu, Cheng Tan, Sen Na, Qinan Hu, Yaohai Huang

Research output: Contribution to journal › Conference article › peer-review

Abstract

This paper describes the THCIB systems that used in the ShARe/CLEF eHealth 2013 task 1. We implemented two baseline systems and a combination system using the existing technologies. One baseline system is built using MetaMap. We built another baseline system using cTAKES. Furthermore, we developed the combination system with a system combination method. The results of combination system were submitted because the combined results performed better than either single system. We also report the experimental results on the training set and the test set.

Original language	English
Journal	CEUR Workshop Proceedings
Volume	1179
Publication status	Published - 2013
Externally published	Yes
Event	2013 Cross Language Evaluation Forum Conference, CLEF 2013 - Valencia, Spain Duration: 23 Sept 2013 → 26 Sept 2013

Keywords

Clinical report processing
Disorder normalization
Disorder recognition
Information extraction
Natural language processing

Cite this

@article{0c3e1ba1403347dda4da21a10a05fd8b,

title = "Combining MetaMap and cTAKES in disorder recognition: THCIB at CLEF eHealth lab 2013 task 1",

abstract = "This paper describes the THCIB systems that used in the ShARe/CLEF eHealth 2013 task 1. We implemented two baseline systems and a combination system using the existing technologies. One baseline system is built using MetaMap. We built another baseline system using cTAKES. Furthermore, we developed the combination system with a system combination method. The results of combination system were submitted because the combined results performed better than either single system. We also report the experimental results on the training set and the test set.",

keywords = "Clinical report processing, Disorder normalization, Disorder recognition, Information extraction, Natural language processing",

author = "Yunqing Xia and Xiaoshi Zhong and Peng Liu and Cheng Tan and Sen Na and Qinan Hu and Yaohai Huang",

year = "2013",

language = "English",

volume = "1179",

journal = "CEUR Workshop Proceedings",

issn = "1613-0073",

publisher = "CEUR-WS",

note = "2013 Cross Language Evaluation Forum Conference, CLEF 2013 ; Conference date: 23-09-2013 Through 26-09-2013",

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TY - JOUR

T1 - Combining MetaMap and cTAKES in disorder recognition

T2 - 2013 Cross Language Evaluation Forum Conference, CLEF 2013

AU - Xia, Yunqing

AU - Zhong, Xiaoshi

AU - Liu, Peng

AU - Tan, Cheng

AU - Na, Sen

AU - Hu, Qinan

AU - Huang, Yaohai

PY - 2013

Y1 - 2013

N2 - This paper describes the THCIB systems that used in the ShARe/CLEF eHealth 2013 task 1. We implemented two baseline systems and a combination system using the existing technologies. One baseline system is built using MetaMap. We built another baseline system using cTAKES. Furthermore, we developed the combination system with a system combination method. The results of combination system were submitted because the combined results performed better than either single system. We also report the experimental results on the training set and the test set.

AB - This paper describes the THCIB systems that used in the ShARe/CLEF eHealth 2013 task 1. We implemented two baseline systems and a combination system using the existing technologies. One baseline system is built using MetaMap. We built another baseline system using cTAKES. Furthermore, we developed the combination system with a system combination method. The results of combination system were submitted because the combined results performed better than either single system. We also report the experimental results on the training set and the test set.

KW - Clinical report processing

KW - Disorder normalization

KW - Disorder recognition

KW - Information extraction

KW - Natural language processing

UR - http://www.scopus.com/inward/record.url?scp=84922032278&partnerID=8YFLogxK

M3 - Conference article

AN - SCOPUS:84922032278

SN - 1613-0073

VL - 1179

JO - CEUR Workshop Proceedings

JF - CEUR Workshop Proceedings

Y2 - 23 September 2013 through 26 September 2013

ER -

Combining MetaMap and cTAKES in disorder recognition: THCIB at CLEF eHealth lab 2013 task 1

Abstract

Keywords

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