TY - GEN
T1 - Automated Sorting of Rare Cells Based on Autofocusing Visual Feedback in Fluorescence Microscopy
AU - Bai, Kailun
AU - Wang, Huaping
AU - Shi, Qing
AU - Zheng, Zhiqiang
AU - Cui, Juan
AU - Sun, Tao
AU - Huang, Qiang
AU - Dario, Paolo
AU - Fukuda, Toshio
N1 - Publisher Copyright:
© 2019 IEEE.
PY - 2019/11
Y1 - 2019/11
N2 - The research on rare cells makes a significant contribution to biology research and medical treatment for the application of diagnostic operation as well as prognoses treatment. Therefore, sorting them from heterogeneous mixtures is crucial and valuable. Traditional cell sorting methods featured with poor purity and recovery rate as well as limited flexibility, which are not ideal approaches for rare type. In this paper, we proposed a cell screening method based on automated microrobotic aspiration-and-placement strategy under fluorescence microscope. An innovative autofocusing visual feedback (AVF) method is proposed for precise three-dimensional (3D) locating of target cells. For depth detection, multiple depth from defocus (MDFD) method is adopted to solve symmetry problem and attain an average accuracy of 97.07%. For planar locating, Markov random field (MRF) based locating method is utilized to separate and locate the overlapped cells. The end actuator locating and real-time tracking are performed relying on normalized cross-correlation (NCC) method. Experiential results show that our system collects rare cells (100 cells ml-1) at a speed of 5 cells min-1 with 90% purity and 75% recovery rate, which is valuable for biological and medical application.
AB - The research on rare cells makes a significant contribution to biology research and medical treatment for the application of diagnostic operation as well as prognoses treatment. Therefore, sorting them from heterogeneous mixtures is crucial and valuable. Traditional cell sorting methods featured with poor purity and recovery rate as well as limited flexibility, which are not ideal approaches for rare type. In this paper, we proposed a cell screening method based on automated microrobotic aspiration-and-placement strategy under fluorescence microscope. An innovative autofocusing visual feedback (AVF) method is proposed for precise three-dimensional (3D) locating of target cells. For depth detection, multiple depth from defocus (MDFD) method is adopted to solve symmetry problem and attain an average accuracy of 97.07%. For planar locating, Markov random field (MRF) based locating method is utilized to separate and locate the overlapped cells. The end actuator locating and real-time tracking are performed relying on normalized cross-correlation (NCC) method. Experiential results show that our system collects rare cells (100 cells ml-1) at a speed of 5 cells min-1 with 90% purity and 75% recovery rate, which is valuable for biological and medical application.
UR - http://www.scopus.com/inward/record.url?scp=85081167579&partnerID=8YFLogxK
U2 - 10.1109/IROS40897.2019.8968207
DO - 10.1109/IROS40897.2019.8968207
M3 - Conference contribution
AN - SCOPUS:85081167579
T3 - IEEE International Conference on Intelligent Robots and Systems
SP - 1567
EP - 1572
BT - 2019 IEEE/RSJ International Conference on Intelligent Robots and Systems, IROS 2019
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 2019 IEEE/RSJ International Conference on Intelligent Robots and Systems, IROS 2019
Y2 - 3 November 2019 through 8 November 2019
ER -