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Quality assurance using outlier detection on an automatic segmentation method for the cerebellar peduncles

  • Ke Li
  • , Chuyang Ye
  • , Zhen Yang
  • , Aaron Carass
  • , Sarah H. Ying
  • , Jerry L. Prince
  • Johns Hopkins University
  • CAS - Institute of Automation

科研成果: 书/报告/会议事项章节会议稿件同行评审

摘要

Cerebellar peduncles (CPs) are white matter tracts connecting the cerebellum to other brain regions. Automatic segmentation methods of the CPs have been proposed for studying their structure and function. Usually the performance of these methods is evaluated by comparing segmentation results with manual delineations (ground truth). However, when a segmentation method is run on new data (for which no ground truth exists) it is highly desirable to efficiently detect and assess algorithm failures so that these cases can be excluded from scientific analysis. In this work, two outlier detection methods aimed to assess the performance of an automatic CP segmentation algorithm are presented. The first one is a univariate non-parametric method using a box-whisker plot. We first categorize automatic segmentation results of a dataset of diffusion tensor imaging (DTI) scans from 48 subjects as either a success or a failure. We then design three groups of features from the image data of nine categorized failures for failure detection. Results show that most of these features can efficiently detect the true failures. The second method - supervised classification - was employed on a larger DTI dataset of 249 manually categorized subjects. Four classifiers - linear discriminant analysis (LDA), logistic regression (LR), support vector machine (SVM), and random forest classification (RFC) - were trained using the designed features and evaluated using a leave-one-out cross validation. Results show that the LR performs worst among the four classifiers and the other three perform comparably, which demonstrates the feasibility of automatically detecting segmentation failures using classification methods.

源语言英语
主期刊名Medical Imaging 2016
主期刊副标题Image Processing
编辑Martin A. Styner, Elsa D. Angelini, Elsa D. Angelini
出版商SPIE
ISBN(电子版)9781510600195
DOI
出版状态已出版 - 2016
已对外发布
活动Medical Imaging 2016: Image Processing - San Diego, 美国
期限: 1 3月 20163 3月 2016

出版系列

姓名Progress in Biomedical Optics and Imaging - Proceedings of SPIE
9784
ISSN(印刷版)1605-7422

会议

会议Medical Imaging 2016: Image Processing
国家/地区美国
San Diego
时期1/03/163/03/16

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