TY - JOUR
T1 - Pseudarthrobacter albicanus sp. nov., isolated from Antarctic soil
AU - Chen, Ya
AU - Zhang, Hao
AU - Ping, Weiwei
AU - Zhu, Lin
AU - Xin, Yuhua
AU - Zhang, Jianli
N1 - Publisher Copyright:
© 2022 The Authors.
PY - 2022
Y1 - 2022
N2 - A Gram-stain positive, strictly aerobic, non-motile and rod-shaped strain, NJ-Z5T, was isolated from a soil sample obtained from the Antarctic Peninsula. This strain was taxonomically characterized by a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain NJ-Z5T belonged to the genus Pseudarthrobacter and showed the highest similarities to Pseudarthrobacter sulfonivorans ALLT (98.07%), followed by Pseudarthrobacter siccitolerans 4J27T (98.00%), Pseudar-throbacter phenanthrenivorans Sphe3T (97.93%) and Pseudarthrobacter psychrotolerans YJ56T (97.82%). The strain was able to grow at 4–28 °C (optimum, 25 °C), at pH 6.0–8.0 (optimum, pH 7.0) and with 0–1.0% (w/v) NaCl (optimum, 0%). It had catalase activity but no oxidase activity. The chemotaxonomic characteristics of strain NJ-Z5T, which had MK-9 (H2 ) as its predominant menaquinone and anteiso-C15:0 (58.5%), anteiso-C17:0 (9.9%) and iso-C16:0 (7.0%) as its major fatty acids, were consistent with classification in the genus Pseudarthrobacter. The polar lipid profile of strain NJ-Z5T comprised phosphatidylinositol, diphos-phatidylglycerol, phosphatidylglycerol, three unidentified glycolipids and two unidentified phospholipids. The genome of strain NJ-Z5T was 4.57 Mbp with a G+C content of 67.1 mol%. Average nucleotide identity (ANI) values between strain NJ-Z5T and other species of the genus Pseudarthrobacter were found to be low (ANIm <86%, ANIb <80% and OrthoANIu <80 %). Furthermore, digital DNA–DNA hybridization (dDDH) and average amino acid identity (AAI) values between strain NJ-Z5T and the closely related species ranged from 22.7 to 24.0% and from 75.5 to 77.2%, respectively. On the basis of its differential physiological properties, chemotaxonomic characteristics and low ANI, dDDH and AAI results, strain NJ-Z5T is considered to represent a novel species within the genus Pseudarthrobacter, for which the name Pseudarthrobacter albicanus sp. nov. is proposed. The type strain is NJ-Z5T (=CGMCC 1.15636T=KCTC 39722T).
AB - A Gram-stain positive, strictly aerobic, non-motile and rod-shaped strain, NJ-Z5T, was isolated from a soil sample obtained from the Antarctic Peninsula. This strain was taxonomically characterized by a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain NJ-Z5T belonged to the genus Pseudarthrobacter and showed the highest similarities to Pseudarthrobacter sulfonivorans ALLT (98.07%), followed by Pseudarthrobacter siccitolerans 4J27T (98.00%), Pseudar-throbacter phenanthrenivorans Sphe3T (97.93%) and Pseudarthrobacter psychrotolerans YJ56T (97.82%). The strain was able to grow at 4–28 °C (optimum, 25 °C), at pH 6.0–8.0 (optimum, pH 7.0) and with 0–1.0% (w/v) NaCl (optimum, 0%). It had catalase activity but no oxidase activity. The chemotaxonomic characteristics of strain NJ-Z5T, which had MK-9 (H2 ) as its predominant menaquinone and anteiso-C15:0 (58.5%), anteiso-C17:0 (9.9%) and iso-C16:0 (7.0%) as its major fatty acids, were consistent with classification in the genus Pseudarthrobacter. The polar lipid profile of strain NJ-Z5T comprised phosphatidylinositol, diphos-phatidylglycerol, phosphatidylglycerol, three unidentified glycolipids and two unidentified phospholipids. The genome of strain NJ-Z5T was 4.57 Mbp with a G+C content of 67.1 mol%. Average nucleotide identity (ANI) values between strain NJ-Z5T and other species of the genus Pseudarthrobacter were found to be low (ANIm <86%, ANIb <80% and OrthoANIu <80 %). Furthermore, digital DNA–DNA hybridization (dDDH) and average amino acid identity (AAI) values between strain NJ-Z5T and the closely related species ranged from 22.7 to 24.0% and from 75.5 to 77.2%, respectively. On the basis of its differential physiological properties, chemotaxonomic characteristics and low ANI, dDDH and AAI results, strain NJ-Z5T is considered to represent a novel species within the genus Pseudarthrobacter, for which the name Pseudarthrobacter albicanus sp. nov. is proposed. The type strain is NJ-Z5T (=CGMCC 1.15636T=KCTC 39722T).
KW - Actinobacteria
KW - New taxa
KW - Novel species
KW - Pseudarthrobacter
UR - http://www.scopus.com/inward/record.url?scp=85122805195&partnerID=8YFLogxK
U2 - 10.1099/ijsem.0.005182
DO - 10.1099/ijsem.0.005182
M3 - Article
C2 - 35037850
AN - SCOPUS:85122805195
SN - 1466-5026
VL - 72
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 1
M1 - 005182
ER -