Multimodal Uncertainty Robust Tree Cover Segmentation for High-Resolution Remote Sensing Images

Recentadvances in semantic segmentation of multimodal remote sensing images have significantly improved the accuracy of tree cover mapping, supporting applications in urban planning, forest monitoring, and ecological assessment. Integrating data from multiple modalities—such as optical imagery, light detection and ranging (LiDAR), and synthetic aperture radar (SAR)—has shown superior performance over single-modality methods. However, these data are often acquired days or even months apart, during which various changes may occur, such as vegetation disturbances (e.g., logging, and wildfires) and variations in imaging quality. Such temporal misalignments introduce cross-modal uncertainty, especially in high-resolution imagery, which can severely degrade segmentation accuracy. To address this challenge, we propose MURTreeFormer, a novel multimodal segmentation framework that mitigates and leverages aleatoric uncertainty for robust tree cover mapping. MURTreeFormer treats one modality as primary and others as auxiliary, explicitly modeling patch-level uncertainty in the auxiliary modalities via a probabilistic latent representation. Uncertain patches are identified and reconstructed from the primary modality’s distribution through a VAE-based resampling mechanism, producing enhanced auxiliary features for fusion. In the decoder, a gradient magnitude attention (GMA) module and a lightweight refinement head (RH) are further integrated to guide attention toward treelike structures and to preserve fine-grained spatial details. Extensive experiments on multimodal datasets from Shanghai and Zurich demonstrate that MURTreeFormer significantly improves segmentation performance and effectively reduces the impact of temporally induced aleatoric uncertainty.