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Cerebrovascular Segmentation Algorithm Based on Focused Multi-Gaussians Model and Weighted 3D Markov Random Field

  • Zhilong Lv
  • , Rui Yan
  • , Xinyu Liu
  • , Zhongke Wu
  • , Yicheng Zhu
  • , Shiwei Sun
  • , Fa Zhang
  • , Xingce Wang
  • , Xiaohua Wan
  • CAS - Institute of Computing Technology
  • University of Chinese Academy of Sciences
  • School of Computer Science and Technology, Anhui University
  • Beijing Normal University
  • Chinese Academy of Medical Sciences

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Segmenting the cerebral vessels precisely from the time-of-flight magnetic resonance angiography (TOF-MRA) images is important for the diagnosis and therapy of the cerebrovascular diseases. Since the complex structures of cerebral vessels, the current cerebrovascular segmentation algorithms based on statistical model have less accuracy for stenotic vessels and are quite time-consuming. In this paper, we propose a novel automatic cerebrovascular segmentation algorithm based on focused Multi-Gaussians (FMG) model and weighted 3D Markov Random Field. As far as our knowledge, this is the first time to adopt multi-Gaussians distributions as vascular model with the purpose of modeling the vascular tissue more accurately. Furthermore, the fitting range is narrowed to local region related to vessels in order to make the model focus on the vascular tissue and simplify the finite mixture model. To incorporate precise local character of images to the model, we design a new weighted 3D MRF by a weighted neighborhood system (W-NBS). Finally, the particle swarm optimization (PSO) algorithm of parameter estimation has been implemented parallelly based on GPUs and the execution speed was improved by about 70 times. The experimental results show that the algorithm can produce detailed segmentation results especially for stenotic vessels.

Original languageEnglish
Title of host publicationProceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019
EditorsIllhoi Yoo, Jinbo Bi, Xiaohua Tony Hu
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages846-851
Number of pages6
ISBN (Electronic)9781728118673
DOIs
Publication statusPublished - Nov 2019
Externally publishedYes
Event2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019 - San Diego, United States
Duration: 18 Nov 201921 Nov 2019

Publication series

NameProceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019

Conference

Conference2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019
Country/TerritoryUnited States
CitySan Diego
Period18/11/1921/11/19

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Markov random field
  • cerebrovascular segmentation
  • finite mixture model

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