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An automated method with anchor-free detection and U-shaped segmentation for nuclei instance segmentation

  • Xuan Feng
  • , Lijuan Duan*
  • , Jie Chen
  • *Corresponding author for this work
  • Beijing University of Technology
  • Beijing Municipal Key Laboratory of Trusted Computing
  • National Engineering Laboratory for Critical Technologies of Information Security Classified Protection
  • Peng Cheng Laboratory

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Nuclei segmentation plays an important role in cancer diagnosis. Automated methods for digital pathology become popular due to the developments of deep learning and neural networks. However, this task still faces challenges. Most of current techniques cannot be applied directly because of the clustered state and the large number of nuclei in images. Moreover, anchor-based methods for object detection lead a huge amount of calculation, which is even worse on pathological images with a large target density. To address these issues, we propose a novel network with an anchor-free detection and a U-shaped segmentation. An altered feature enhancement module is attached to improve the performance in dense target detection. Meanwhile, the U-Shaped structure in segmentation block ensures the aggregation of features in different dimensions generated from the backbone network. We evaluate our work on a Multi-Organ Nuclei Segmentation dataset from MICCAI 2018 challenge. In comparisons with others, our proposed method achieves state-of-the-art performance.

Original languageEnglish
Title of host publicationProceedings of the 2nd ACM International Conference on Multimedia in Asia, MMAsia 2020
PublisherAssociation for Computing Machinery, Inc
ISBN (Electronic)9781450383080
DOIs
Publication statusPublished - 7 Mar 2021
Externally publishedYes
Event2nd ACM International Conference on Multimedia in Asia, MMAsia 2020 - Virtual, Online, Singapore
Duration: 7 Mar 2021 → …

Publication series

NameProceedings of the 2nd ACM International Conference on Multimedia in Asia, MMAsia 2020

Conference

Conference2nd ACM International Conference on Multimedia in Asia, MMAsia 2020
Country/TerritorySingapore
CityVirtual, Online
Period7/03/21 → …

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • deep learning
  • digital pathology
  • nuclei detection
  • nuclei segmentation

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